Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Anna Poetsch or Anup Kumar or Bruno Gaeta or Deshpande, Nandan (orcid: 0000-0002-0324-8728) or Federico Bianchini or Fotis E. Psomopoulos or allegra.via Via
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hands-on tutorial
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
hands-on tutorial
Binning of metagenomic sequencing data
• beginnerMetagenomics Microbial ecology Sequence assembly Microbiome binning metagenomics microgalaxy -
hands-on tutorial
Train-the-Trainer: putting it all together
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
Asynchronous training
• beginnerTeaching and Hosting Galaxy training -
Presentation
Create and a Handle Data Management Plan
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Slides
Life Sciences Research Data Management 2023 Course by ELIXIR Norway
• beginnerData management Data submission, annotation, and curation Data handling Deposition Data retrieval -
WEBINAR: Getting started with RNAseq: Transforming raw reads into biological insights
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Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
WORKSHOP: RNA-Seq: reads to differential genes and pathways
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hands-on tutorial
Teaching online
• beginnerTeaching and Hosting Galaxy training