Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Alexandre Cormier or Biocore@CRG or Boris Steipe or Deshpande, Nandan (orcid: 0000-0002-0324-8728) or Gary Bader or Jan Slifka
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WEBINAR: Getting started with RNAseq: Transforming raw reads into biological insights
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WORKSHOP: RNA-Seq: reads to differential genes and pathways
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WEBINAR: Portable, reproducible and scalable bioinformatics workflows using Nextflow and Pawsey Nimbus Cloud
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
WORKSHOP: Working with genomics sequences and features in R with Bioconductor
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hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis
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