Training materials
Target audience: Students
and Authors: Alexander Botzki or Anna Syme or Bazante Sanders or John Chilton or Jonathan Karr or Pratik Jagtap
-
slides
Introduction to metatranscriptomics
• beginnerMetagenomics Microbial ecology Microbiome -
hands-on tutorial
Hands-on for 'Large genome assembly and polishing' tutorial
-
hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial
-
hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Oxford Nanopore MinION Data' tutorial
-
hands-on tutorial
Hands-on for 'Chloroplast genome assembly' tutorial
-
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Illumina MiSeq Data' tutorial
-
hands-on tutorial
Hands-on for 'metaQuantome 3: Taxonomy' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'Proteogenomics 1: Database Creation' tutorial
•• intermediateproteomics proteogenomics