Training materials
Difficulty level: Intermediate
and Authors: Alexander Botzki or Alexandre Cormier or Jan Slifka or Javi Conejero or Maria Christina Maniou or Matthias Fahrner
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'Library Generation for DIA Analysis' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'DIA Analysis using OpenSwathWorkflow' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'Statistical analysis of DIA data' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'MaxQuant and MSstats for the analysis of label-free data' tutorial
•• intermediateproteomics label-free -
hands-on tutorial
Hands-on for 'Plotting in Python' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced Python' tutorial
•• intermediatedata-science jupyter-notebook -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks
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