Training materials
Difficulty level: Intermediate
and Authors: Alexander Botzki or Alexandre Cormier or Jan Slifka or Javi Conejero or Maria Christina Maniou or Marius van den Beek
-
Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'Plotting in Python' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced Python' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Creating, Editing and Importing Galaxy Workflows' tutorial
•• intermediategalaxy-interface workflows -
hands-on tutorial
Hands-on for 'Using Workflow Parameters' tutorial
•• intermediategalaxy-interface workflows -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow