Training materials
Scientific topics: Data integration and warehousing or Transcriptomics
and Authors: Alex Ostrovsky or Emma Griffiths or Nicola Soranzo or erasche
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hands-on tutorial
Hands-on for 'Single-cell quality control with scater' tutorial
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hands-on tutorial
Hands-on for 'Downstream Single-cell RNA analysis with RaceID' tutorial
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
slides
Slides for 'Plates, Batches, and Barcodes' tutorial
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slides
Slides for 'Dealing with Cross-Contamination in Fixed Barcode Protocols' tutorial
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Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Video
Solutions for overcoming cohort data integration challenges using ontology: an introduction
• beginnerOntology and terminology Data integration and warehousing Data management Ontologies Data integration Annotation