Training materials
Authors: Alex Ostrovsky or Beatriz Serrano-Solano
and Contributors: Ajay Pillai or Alireza Khanteymoori or Anatole Chessel or Beatriz Serrano-Solano or Mehmet Tekman or Simon Gladman
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hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Object tracking using CellProfiler
• beginnerImaging -
hands-on tutorial
Nucleoli segmentation and feature extraction using CellProfiler
• beginnerImaging -
slides
Plates, Batches, and Barcodes
• beginnerTranscriptomics Single Cell -
slides
Dealing with Cross-Contamination in Fixed Barcode Protocols
• beginnerTranscriptomics Single Cell -
slides
Nucleoli Segmentation <br> & <br> Feature Extraction <br> using CellProfiler
• beginnerImaging