Training materials
Authors: Alex Ostrovsky or Anup Kumar or Dayane Araujo or Gary Bader or Jared Simpson or Pratik Jagtap or Saskia Lawson-Tovey or Sorana Morrissy
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hands-on tutorial
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
slides
Introduction to metatranscriptomics
• beginnerMetagenomics Microbial ecology Microbiome -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
Video
RDMbites | REDCap: how to run data quality checks
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Video
RDMbites | REDCap: how to set missing data codes
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Video
RDMbites | REDCap: how to add minimum/maximum and date/time formats
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Video
RDMbites | REDCap: how to disable selected multiple choice options
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Video
RDMbites | REDCap: how to build a medication table