Training materials
Authors: Aidan Budd or Dave Clements or Guillaume Bourque or Helen Brown or Maria Lehtivaara or Monique Zahn or bgruening
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hands-on tutorial
16S Microbial Analysis with mothur (extended)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy -
hands-on tutorial
16S Microbial Analysis with mothur (short)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy -
slides
Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses -
e-learning
Identifiers in Bioinformatics
• beginnerData management Data identity and mapping Data handling Data retrieval Database search Interoperability Identifiers Standards -
e-learning
Interoperable File Formats
• beginnerData management Data formatting Interoperability File formats Standards -
e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Data management Data curation and archival Data handling Data retrieval Database search Ontologies Interoperability Standardised vocabulary Standards -
e-learning
ViralZone: Studying viral diversity
• beginnerVirology Genomics Molecular biology virology -
e-learning
Make sense of COVID-19 data
• beginnerVirology Data visualisation SARS-CoV-2 -
e-learning
Interpret phylogenetic data to track SARS-CoV-2 evolution
• beginnerVirology Phylogenetics SARS-CoV-2 -
e-learning
Use V-pipe to evaluate SARS-CoV-2 sequence variability
• beginnerVirology Sequence analysis SARS-CoV-2 Variant calling