Training materials
Authors: Aidan Budd or Alex Ostrovsky or Alexander Botzki or Anna Poetsch or Björn Grüning or Bérénice Batut or Subina Mehta or rstudio::conf(2022)
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hands-on tutorial
Checking expected species and contamination in bacterial isolate
• beginnerEcology Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
hands-on tutorial
Clinical-MP-4-Quantitation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-5-Data Interpretation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-3-Verification
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-2-Discovery
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-1-Database-Generation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Genome Annotation
• beginnerGenome Annotation prokaryote work-in-progress -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod illumina jbrowse1 microgalaxy -
hands-on tutorial
16S Microbial Analysis with mothur (extended)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy