Training materials
Scientific topics: Data management or RNA-Seq or Software engineering
and Authors: Agata Bochynska or Jorge Buenabad-Chavez or The Carpentries or bioinformatics.ca
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bioinformaticsdotca/PNA_2023
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bioinformaticsdotca/RNA_2023
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bioinformaticsdotca/scRNA_2023
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course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
hands-on tutorial
Hands-on for 'Python - Coding Style' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Virtual Environments For Software Development' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Conda Environments For Software Development' tutorial
•• intermediatedata-science conda jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Testing' tutorial
•• intermediatedata-science jupyter-notebook -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
hands-on tutorial
Hands-on for 'SQL with R' tutorial
•• intermediatedata-science SQL R jupyter-notebook rmarkdown-notebook