Training materials
Difficulty level: Beginner
and Authors: Anne Segonds-Pichon or Aidan Budd or Anton Nekrutenko or Evelyn Greeves or NovaMechanics Ltd or Saskia Hiltemann or Simon Andrews
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hands-on tutorial
Introduction to sequencing with Python (part three)
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Introduction to sequencing with Python (part two)
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Introduction to sequencing with Python (part one)
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Data manipulation with Pandas
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Data Manipulation Olympics - SQL
• beginnerSoftware engineering Foundations of Data Science cyoa jupyter-notebook sql -
hands-on tutorial
Introduction to sequencing with Python (part four)
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Data Manipulation Olympics - JQ
• beginnerSoftware engineering Foundations of Data Science cyoa json -
hands-on tutorial
16S Microbial Analysis with mothur (extended)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy -
hands-on tutorial
Antibiotic resistance detection
• beginnerMetagenomics Microbial ecology Metagenomic sequencing Public health and epidemiology Microbiology Infectious disease Sequence analysis Antimicrobial Resistance Microbiome amr assembly microgalaxy nanopore plasmids -
hands-on tutorial
16S Microbial Analysis with mothur (short)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy