Training materials
Difficulty level: Intermediate
and Authors: Alexander Botzki | https://orcid.org/0000-0001... or Alexandre Cormier or Fotis E. Psomopoulos or Jessica Kirkpatrick krkptrc2@illinois.edu or Lars Juhl Jensen or Tharindu Senapathi
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Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'Introduction to Machine Learning using R' tutorial
•• intermediatestatistics interactive-tools -
hands-on tutorial
Hands-on for 'Plotting in Python' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediatedata-science R -
hands-on tutorial
Hands-on for 'Advanced Python' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Analysis of molecular dynamics simulations
•• intermediateComputational chemistry -
hands-on tutorial
Running molecular dynamics simulations using NAMD
•• intermediateComputational chemistry -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining
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