Training materials
Authors: @posit-pbc or Daniel Blankenberg or Jessica Kirkpatrick krkptrc2@illinois.edu or Monique Zahn or Pavankumar Videm or Simon Gladman
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e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
slides
Slides for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediatevariant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial
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hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerassembly prokaryote -
hands-on tutorial
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly