Workshop, Presentation, hands-on tutorial

FEGA Metadata Technical Deep Dive

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This technical deep-dive workshop introduces participants to the Federated European Genome-Phenome Archive (FEGA) metadata model, focusing on hands-on exercises in metadata validation and JSON-LD transformations. Attendees learn how to set up and use Biovalidator to ensure the structural and semantic correctness of metadata, explore the design of FEGA’s JSON Schemas, and practice transforming JSON-LD into different formats. These sessions are intended for bioinformaticians, curators, and developers who want to improve metadata quality and interoperability in genomic data sharing.

DOI: https://doi.org/10.5281/zenodo.14968151

Licence: Creative Commons Attribution 4.0 International

Contact: mcasado@ebi.ac.uk

Keywords: linked data, json, JSON-LD, JSON Schemas, Federated EGA, FEGA, FAIR principles, Metadata validation, EGA, Metadata, Biovalidator, GitHub

Resource type: Workshop, Presentation, hands-on tutorial

Status: Active

Learning objectives:

Learn to: (1) install and use Biovalidator; (2) handle JSON Schemas; (3) JSON-LD transformations

Date created: 2025-03-04

Date published: 2025-03-04

Authors: Marcos Casado Barbero (0000-0002-7747-6256)

Operations: Validation

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