Informatics on High-throughput Sequencing Data
9 - 10 June 2016
Montreal, CanadaInformatics on High-throughput Sequencing Data http://bioinformatics.ca/workshops/2016/informatics-high-throughput-sequencing-data-2016 https://tess.elixir-europe.org/events/informatics-on-high-throughput-sequencing-data-d2e46447-140f-4580-bce4-4653fbac30be 2016-06-09 01:00:00 UTC 2016-06-10 01:00:00 UTC Montreal, Canada Montreal Canada Bioinformatics    workshops_and_courses  
RECOMB Comparative genomics
11 - 14 June 2016
Montreal, CanadaRECOMB Comparative genomics http://www.crm.umontreal.ca/2016/Genomics16/index_e.php https://tess.elixir-europe.org/events/recomb-comparative-genomics Despite the remarkable unity of the basic components of the living world (DNA, RNA, the genetic code), we are probably still not aware of the diversity of genome structures nor of the diversity of means genomes use to evolve. Rearrangements, gene transfers, duplications, transposable elements, single nucleotide substitutions, repetitions, insertions, deletions, have been successively discovered and modeled in the XXth century. They are used to document the evolutionary history of life on earth and to understand adaptation processes. 2016-06-11 09:00:00 UTC 2016-06-14 00:00:00 UTC nadia El-mabrouk Institut de Tourisme et d’hôtellerie du Québec, Montreal, Canada Institut de Tourisme et d’hôtellerie du Québec Montreal Canada Genomics    workshops_and_courses  
Epigenomic Data Analysis
15 - 16 June 2017
Montreal, CanadaEpigenomic Data Analysis https://bioinformatics.ca/workshops/2017/epigenomic-data-analysis-2017 https://tess.elixir-europe.org/events/epigenomic-data-analysis-814bc674-0a0a-42a1-9bd5-bbc43ae8b2b6 High-throughput sequencing of Chromatin-Immunoprecipitated libraries (ChIP-seq) and of bisulfite converted DNA (WGBS) have become increasingly common and have largely supplanted microarrays for chromatin and DNA methylation profiling. When processed appropriately, ChIP-seq data provides base-pair resolution representations of transcription factor DNA-binding events and nucleosome (histone) modifications genome-wide. Similarly, WGBS can provide a quantitative genome wide profile of cytosine methylation. The CBW has developed a 2-day course providing an introduction to histone ChIP-seq and WGBS data analysis followed by integrated tutorials demonstrating the use of open source ChIP-Seq and WGBS analysis packages. The tutorials are designed as self-contained units that include example data and detailed instructions for installation of all required bioinformatics tools (FASTQC, BWA, MACS2, FindER, samtools, Picard, BisSNP). The course also includes an overview of integrative epigenomic tools that have been developed to explore ChIP-Seq and WGBS data together with other epigenomic datasets such as RNA-seq, DHS-seq and ATAC-seq. Participants will gain practical experience and skills to be able to: Align ChIP-seq and WGBS sequence data to a reference genome (required) Identify narrow and broad peaks from ChIP-seq data Identify methylated levels from WGBS data Visualize and summarize the output of ChIP-Seq and WGBS analyses Explore integrative tools for epigenomic data sets 2017-06-15 08:30:00 UTC 2017-06-16 17:00:00 UTC bioinformatics.ca Montreal, Montreal, Canada Montreal Montreal Montreal Canada ChIP-seq Epigenomics  firstname.lastname@example.org   30 workshops_and_courses registration_of_interest 
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