Organizer: Universidade do Minho

Host institution: Universidade do Minho

Start: Monday, 03 June 2019 @ 09:00

End: Friday, 07 June 2019 @ 17:00

Contact: s2m2.course@gmail.com

Venue: University of Minho - Campus of Gualtar, Rua da Universidade

City: Braga

County: Portugal

Country: Portugal

Postcode: 4710-057 Braga

Target audience:
  • everyone who is interested in learning to use metabolic modelling in their research, using user-friendly tools. No programming skills are required.
Description:

This 5-day duration summer school will focus on user-friendly tools for metabolic model reconstruction and simulation and experimental procedures to improve those models.
The course is directed to everyone who is interested in learning to use metabolic modelling in their research, using user-friendly tools. No programming skills are required.

Course attendants will be participating in activities covering the following topics:
- Basic concepts in metabolic modelling
- Genome annotation and metabolic model reconstruction with merlin.
- KBase: A collaborative, open environment for systems biology of plants, microbes and their communities.
- Optflux: an open-source software platform for in silico metabolic engineering.
- Experimental determination of biomass composition and its inclusion in genome-scale metabolic models.
- Experimental metabolomics analysis using GC-MS and its inclusion in genome-scale metabolic models.

Event type:
  • Workshops and courses

Capacity: 20

Eligibility:
  • Registration of interest

Keywords: metabolic modelling, Genome, open-source software platform

Summer School in Metabolic Modelling https://tess.elixir-europe.org/events/summer-school-in-metabolic-modelling This 5-day duration summer school will focus on user-friendly tools for metabolic model reconstruction and simulation and experimental procedures to improve those models. The course is directed to everyone who is interested in learning to use metabolic modelling in their research, using user-friendly tools. No programming skills are required. Course attendants will be participating in activities covering the following topics: - Basic concepts in metabolic modelling - Genome annotation and metabolic model reconstruction with merlin. - KBase: A collaborative, open environment for systems biology of plants, microbes and their communities. - Optflux: an open-source software platform for in silico metabolic engineering. - Experimental determination of biomass composition and its inclusion in genome-scale metabolic models. - Experimental metabolomics analysis using GC-MS and its inclusion in genome-scale metabolic models. 2019-06-03 09:00:00 UTC 2019-06-07 17:00:00 UTC Universidade do Minho University of Minho - Campus of Gualtar, Rua da Universidade, Braga, Portugal University of Minho - Campus of Gualtar, Rua da Universidade Braga Portugal Portugal 4710-057 Braga Universidade do Minho s2m2.course@gmail.com [] everyone who is interested in learning to use metabolic modelling in their research, using user-friendly tools. No programming skills are required. 20 workshops_and_courses registration_of_interest metabolic modelling, Genome, open-source software platform