Content Providers
Keywords: Data sharing or EuBIC or Genomics or interoperability or product safety
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NanoCommons
NanoCommons will deliver a sustainable and openly accessible nanoinformatics framework (knowledgebase and integrated computational tools, supported by expert advice, data interpretation and training), for assessment of the risks of NMs, their products and their formulations. NanoCommons combines...
9 training materials0 events (21 past events)NanoCommons https://www.nanocommons.eu/ https://tess.elixir-europe.org/content_providers/nanocommons NanoCommons will deliver a sustainable and openly accessible nanoinformatics framework (knowledgebase and integrated computational tools, supported by expert advice, data interpretation and training), for assessment of the risks of NMs, their products and their formulations. NanoCommons combines Joint Research Activities to implement the nanoinformatics Knowledge Commons, Networking Activities to facilitate engagement with the research community, industry and regulators, and provision of funded Access to the nanoinformatics tools via funded calls for Transnational Access. /system/content_providers/images/000/000/099/original/NanoCommons-Logo-Sphere-Trans-White-circle-512px.png?1650899421 -
Department of Bioinformatics - BiGCaT, Maastricht University
The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate...
8 training materials0 events (1 past event)Department of Bioinformatics - BiGCaT, Maastricht University https://www.bigcat.unimaas.nl/ https://tess.elixir-europe.org/content_providers/department-of-bioinformatics-bigcat-maastricht-university The department of Bioinformatics-BiGCaT is part of NUTRIM the school of Nutrition and Translational Research in Metabolism at Maastricht University, the Netherlands. It was founded in 2001 by Prof. dr. Chris Evelo aiming at employing bioinformatics approaches in systems biology to integrate experimental data and data with current knowledge. Integrative Systems Biology is being developed and applied in various research fields. The department has four core research areas; 1) Metabolic diseases, 2) Micronutrients, 3) Toxicity and risk Assessment and 4) Rare diseases. Within these areas different types of data, like transcriptomics, proteomics, metabolomics and (epi)genomics data, are collected , integrated and combined with existing knowledge /system/content_providers/images/000/000/093/original/logo_05_72dpi.gif?1528366508 -
Proteomics Academy
EuPA Educational Committee
The EuPA Educational Committee supports educational initiatives in proteomics. Our aim is to make proteomics techniques affordable to all. We designed this website to provide the scientific community with free and open educational material.
EuBICThe European...
4 training materials0 events (1 past event)Proteomics Academy http://www.proteomics-academy.org/ https://tess.elixir-europe.org/content_providers/proteomics-academy EuPA Educational Committee The EuPA Educational Committee supports educational initiatives in proteomics. Our aim is to make proteomics techniques affordable to all. We designed this website to provide the scientific community with free and open educational material. EuBIC The European Bioinformatics Community (EuBIC) is a EuPA initiative for user-oriented bioinformatics. Our aim is to improve bioinformatics through the set-up of community driven dynamics improving the funding, publication, and work in user-oriented bioinformatics. In order to better disseminate bioinformatics among the scientific community, we also distribute educational material freely through this website, organize teaching, and a yearly conference. We function on a spontaneous voluntary basis, anyone is free to join, just contact us to stay tuned on the latest events! The Proteomics Academy is a joint effort of the European Proteomics Association (EuPA) educational committee and the European Bioinformatics Community (EuBIC) initiative. Our aim is to foster interaction between scientists interested in proteomics in an open, constructive, and collaborative way. We will be happy to answer your questions, receive your suggestions, and we welcome anyone wanting to join this community effort! /system/content_providers/images/000/000/064/original/97d05c_c3fb133973c34e318b81d122091dd238.png?1484056294 -
Centre for Genomic Regulation (CRG)
The CRG is an international biomedical research institute of excellence whose mission is to discover and advance knowledge for the benefit of society, public health and economic prosperity.
4 training materials0 events (2 past events)Centre for Genomic Regulation (CRG) https://www.crg.eu https://tess.elixir-europe.org/content_providers/centre-for-genomic-regulation-crg The CRG is an international biomedical research institute of excellence whose mission is to discover and advance knowledge for the benefit of society, public health and economic prosperity. /system/content_providers/images/000/000/647/original/LOGOs-CRG-ENG_2014.jpg?1659436926 -
CNAG-CRG
The Centro Nacional de Análisis Genómico (CNAG-CRG) has the mission to carry out projects in DNA sequencing and analysis in collaboration with researchers from Catalonia, Spain and from the international research community.
1 training materialCNAG-CRG https://www.cnag.crg.eu/ https://tess.elixir-europe.org/content_providers/cnag-crg The Centro Nacional de Análisis Genómico (CNAG-CRG) has the mission to carry out projects in DNA sequencing and analysis in collaboration with researchers from Catalonia, Spain and from the international research community. /system/content_providers/images/000/000/645/original/cnag.crg-logo_horizontal_complete.jpg?1657536294 -
Cloud-SPAN
Cloud-SPAN deploys high quality learning resources that will train researchers to effectively generate and analyse a range of 'omics data using Cloud computing resources. The following activities and learning materials related to the project:
- Prenomics
- Genomics
- Create your own AWS...1 training materialCloud-SPAN https://cloud-span.york.ac.uk/ https://tess.elixir-europe.org/content_providers/cloud-span Cloud-SPAN deploys high quality learning resources that will train researchers to effectively generate and analyse a range of 'omics data using Cloud computing resources. The following activities and learning materials related to the project: - Prenomics - Genomics - Create your own AWS instance - Metagenomics - Statistically useful experimental design - Automation & pipelines (WIP) - Core R (WIP) /system/content_providers/images/000/000/658/original/cloud-span-logo-square.png?1666085149 -
Workflow4metabolomics
In the context of collaboration between metabolomics (MetaboHUB French infrastructure) and bioinformatics platforms (IFB: Institut Français de Bioinformatique), we have developed full LC/MS, FIA-MS, GC/MS and NMR pipelines using Galaxy framework for data analysis including preprocessing,...
Workflow4metabolomics https://workflow4metabolomics.org https://tess.elixir-europe.org/content_providers/workflow4metaolomics In the context of collaboration between metabolomics (MetaboHUB French infrastructure) and bioinformatics platforms (IFB: Institut Français de Bioinformatique), we have developed full LC/MS, FIA-MS, GC/MS and NMR pipelines using Galaxy framework for data analysis including preprocessing, normalization, quality control, statistical analysis (Univariate, Multivariate PLS/OPLS) and annotation steps. Those modular and extensible workflows are composed with existing components (XCMS and CAMERA packages, etc.) but also a whole suite of complementary homemade tools. This implementation is accessible through a web interface, which guarantees the parameters completeness. The advanced features of Galaxy have made possible the integration of components from different sources and of different types. Thus, an extensible Virtual Research Environment (VRE) is offered to metabolomics communities (platforms, end users, etc.), and enables preconfigured workflows sharing for new users, but also experts in the field. /system/content_providers/images/000/000/659/original/17082156.png?1667905557