-
Counting reads for RNA-seq in Bioconductor
-
Multiple testing
-
Working with DNA Sequences
-
Lecture 20-1: Working with Large Data
-
Lab 9-1: Efficient and Parallel Evaluation
-
Gene set enrichment - Introduction
-
Talk
Browsing and searching the Bioconductor codebase
-
Developing robust and efficient code
-
RNA-Seq Differential Expression
-
Talk
R / Bioconductor for open-source analysis and comprehension of high-throughput genomic data
-
eQTL analysis -- an approach with Bioconductor
-
Liftr & sbgr
-
Genomic Ranges For Genome-Scale Data And Annotation
-
Lab: Performance and Parallel Evaluation
-
Week 1: Using R / Bioconductor in AnVIL
-
Appendix: Install IGV
-
Bioconductor annotations: using and sharing resources
-
Gene set enrichment analysis
-
Trends in Genomic Data Analysis in R
-
Variants
-
eQTL / molecular-QTL analyses
-
Talk
Spatial Transcriptomics Technologies and Analysis Tools
-
Week 4: Single-cell RNASeq with 'Orchestrating Single Cell Analysis' in R / Bioconductor
-
Workshops
-
Experimental design
-
Bioconductor
-
Talk
Introduction to DataFrames and the impact of recent changes
-
05: Bioconductor Annotation Resources
-
Multiple testing
-
Differential Gene Expression
Activity log