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DNA-Seq 1: Variant calling
Sequencing -
Week 5: Using AnVIL for teaching R / Bioconductor
Workshop -
Talk
Introduction to DataFrames and the impact of recent changes
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Working with Annotations
Visualisation -
Multiple testing
Statistics and probability -
Working with DNA Sequences
Data Representation -
Counting reads for RNA-seq in Bioconductor
RNA-Seq -
Gene set enrichment - Introduction
Gene-set enrichment analysis -
ChIP-Seq for Understanding Gene Regulation
ChIP-seq -
Google Hangout for New Package Submitters
Best Practices -
Working with gene and genome annotations
Annotation -
Lab: Reproducible Research and R Authoring with markdown and knitr
ReproducibleResearch -
Differential Gene Expression
RNA-Seq -
RNA-Seq Differential Expression
RNA-Seq -
Talk
Q&A about upcoming release
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Lecture 1: Introduction to R and Bioconductor
introduction -
Bioconductor Masterclass: Package Development
Devel -
Introduction to R
R -
Graphics
Graphics -
Liftr & sbgr
Workflows -
Appendix: Install IGV
Appendix -
Talk
Bioconductor updates
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Talk
Pitfalls and best practices for serializing Bioconductor objects
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510: Maintaining your Bioconductor package
Packages -
ChIP-seq with csaw
ChIP-seq -
Visualisation and assessment of ChIP-seq quality using ChIPQC and Diffbind packages
ChIP-seq -
Bioconductor annotations: using and sharing resources
Annotation -
How Bioconductor advances science and contributes to R
Keynote -
Talk
Windows and Rtools 4.0
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R packages for communicating reproducible research
Workshop
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