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GTN Smörgåsbord 3: FAIR data and provenance with RO-Crate and Galaxy - Building RO-Crates - An overview of the RO-Crate concept and its implementations
Galaxy, FAIR data, data provenance, RO-Crate, Publishing Galaxy, FAIR data, data provenance, RO-Crate, Publishing Workflow, GitHub repositories Galaxy, FAIR data, data provenance, RO-Crate, Publishing Workflow, Submitting workflows, LifeMonitor Galaxy, FAIR data, data provenance, RO-Crate, Publishing, Workflow, Registering, WorkflowHub Galaxy, FAIR data, data provenance, RO-Crate, Python Galaxy, FAIR data, data provenance, RO-Crate, RO-Crate concept, RO-Crate implementations Galaxy, FAIR data, data provenance, RO-Crate, Workflow Run, RO-Crate Introduction
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video
RDMbites | Improve your analysis reproducibility and data provenance with computational notebooks
data management RDM
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e-learning
Workflow Run RO-Crate Introduction
• beginnerFAIR Data, Workflows, and Research ro-crate -
e-learning
Exporting Workflow Run RO-Crates from Galaxy
• beginnerFAIR Data, Workflows, and Research ro-crate workflows -
Recorded webinar
Methods in building and analysing biological networks
Protein interactions
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A Critical Guide to UniProtKB
Database management Introduction bioinformatics Introduction uniprot Protein sequence databases Uniprot knowledgebase
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A Critical Guide to BLAST
Introduction bioinformatics Introduction blast Sequence database searching Sequence similarity searching
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A Critical Guide to InterPro
Database management Introduction bioinformatics Introduction interpro Protein family classification Protein family databases Protein family hierarchies Protein function annotation Protein sequence analysis
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A Critical Guide to the UniProtKB Flat-file Format
Database management Flat file databases Flat files Introduction bioinformatics Uniprotkb flat file format
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e-learning
Peptide Library Data Analysis
•• intermediateProteomics -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
Machine Learning Modeling of Anticancer Peptides
•• intermediateProteomics ML cancer -
Introduction to openBIS
• beginnerbasic research data management data visualisation experimental biology interoperability reproducibility training