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Showing 30 materials
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Recorded webinar
Using the PDBe graph API
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Recorded webinar
Explore small molecules in the PDB easily using PDBe-KB Ligand Pages
Protein interactions Small molecules
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Recorded webinar
Creating complex PDBe API queries
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Recorded webinar
Searching with the PDBe API
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Recorded webinar
Introduction to PDBe programmatic access
Protein structure analysis
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e-learning
PDBeFold: Searching for structural homologues of a protein
Structural biology Structural homologues Structure alignments Structural comparison PDBe
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Recorded webinar
PDBe Graph Database: A Neo4J-driven integrative knowledge graph for structural data
Small molecules Protein structure analysis Structural biology
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Recorded webinar
Data visualisation at PDBe
Protein structure analysis
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Recorded webinar
PDBe tools in GitHub
Software engineering
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Recorded webinar
PDBe-KB Aggregated Views: providing biological insights into 3D structures
Structure analysis Protein structure analysis Function analysis
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e-learning
PDBeChem: Searching for small molecules and small molecule fragments
Structural biology Small molecules Ligands PDBe
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A Critical Guide to the PDB
Database management Introduction bioinformatics Introduction pdb Protein structure analysis Protein structure databases Protein structures
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Recorded webinar
A guide to analysing binding sites in protein structures
Protein structure analysis Proteins
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Recorded webinar
Finding and interpreting protein structure and function data using PDBe-KB
Function analysis
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e-learning
PDBe: Exploring a Protein Data Bank entry
Protein structure analysis Protein function PDBe Macromolecular structures
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e-learning
PDBePISA: Identifying and interpreting the likely biological assemblies of a protein structure
Structure prediction Protein structure analysis Quaternary structure Macromolecular interfaces PDBe Macromolecular structures
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Recorded webinar
Mol*: Improved molecular visualisation at PDBe
Protein structure analysis Structure analysis
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e-learning
PDBe: Searching the Protein Data Bank
Protein structure analysis Proteins Structural biology Macromolecular structures PDBe Electron microscopy
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Access Bioinformatics Databases with Biopython
data-science life-sciences data-analysis health-informatics
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e-learning
A journey through bioinformatics: Explore resources from EMBL-EBI
Bioinformatics introduction Bioinformatic databases PDBe
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Recorded webinar
Introductory bioinformatics Q&A session: proteins and structures
Bioinformatics
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Introduction to ProteinsPlus
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Scop3P
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STAO 2014 Understanding a genetic disease thanks to Bioinformatics
Blast Genome browsing Introduction bioinformatics Protein structure visualisation Variant detection
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e-learning
Data management in Medicinal Chemistry
• beginnerComputational chemistry FAIR Data, Workflows, and Research computational-chemistry data-management fair medicinal-chemistry -
e-learning
EMBL-EBI, programmatically: Take a REST from manual searches
Chemical biology Proteins Genetics Introduction API Programmatic access REST PDBe EVA Open Targets
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e-learning
Running molecular dynamics simulations using GROMACS
•• intermediateComputational chemistry -
Recorded webinar
Exploring metabolite metabolism using the Enzyme Portal
Enzymes Metabolomics
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Recorded webinar
Enzyme Portal
Enzymes Biochemical pathways
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youtube video, Series of videos, slideck/ presentation, tutorials
7th Advanced in silico Drug Design workshop lectures
•• intermediateDrug discovery Computational biology Computational chemistry Molecular modelling Molecular dynamics Pharmacology Proteins in silico drug design, Drug design, Drug discovery, Drug screening, pharmacophore, chemical biology, QSAR, Molecular docking, molecular modelling, PDBe, PDBe-KB, ChEMBL, De novo, deep learning, cheminformatics, AlphaFold, Quantum mechanics/molecular mechanics
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