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Showing 30 materials
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Recorded webinar
Using the PDBe graph API
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Recorded webinar
Explore small molecules in the PDB easily using PDBe-KB Ligand Pages
Protein interactions Small molecules
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Recorded webinar
Creating complex PDBe API queries
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Recorded webinar
Searching with the PDBe API
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Recorded webinar
Introduction to PDBe programmatic access
Protein structure analysis
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Recorded webinar
PDBe Graph Database: A Neo4J-driven integrative knowledge graph for structural data
Small molecules Protein structure analysis Structural biology
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e-learning
PDBeFold: Searching for structural homologues of a protein
Structural biology Structural homologues Structure alignments Structural comparison PDBe
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Recorded webinar
Data visualisation at PDBe
Protein structure analysis
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Recorded webinar
PDBe tools in GitHub
Software engineering
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Recorded webinar
PDBe-KB Aggregated Views: providing biological insights into 3D structures
Structure analysis Protein structure analysis Function analysis
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A Critical Guide to the PDB
Database management Introduction bioinformatics Introduction pdb Protein structure analysis Protein structure databases Protein structures
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e-learning
PDBeChem: Searching for small molecules and small molecule fragments
Structural biology Small molecules Ligands PDBe
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Recorded webinar
A guide to analysing binding sites in protein structures
Protein structure analysis Proteins
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Recorded webinar
Finding and interpreting protein structure and function data using PDBe-KB
Function analysis
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e-learning
PDBe: Exploring a Protein Data Bank entry
Protein structure analysis Protein function PDBe Macromolecular structures
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e-learning
PDBePISA: Identifying and interpreting the likely biological assemblies of a protein structure
Structure prediction Protein structure analysis Quaternary structure Macromolecular interfaces PDBe Macromolecular structures
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Recorded webinar
Mol*: Improved molecular visualisation at PDBe
Protein structure analysis Structure analysis
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Access Bioinformatics Databases with Biopython
data-science life-sciences data-analysis health-informatics
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e-learning
PDBe: Searching the Protein Data Bank
Protein structure analysis Proteins Structural biology Macromolecular structures PDBe Electron microscopy
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Introduction to ProteinsPlus
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Recorded webinar
Introductory bioinformatics Q&A session: proteins and structures
Bioinformatics
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e-learning
A journey through bioinformatics: Explore resources from EMBL-EBI
Bioinformatics introduction Bioinformatic databases PDBe
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Scop3P
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STAO 2014 Understanding a genetic disease thanks to Bioinformatics
Blast Genome browsing Introduction bioinformatics Protein structure visualisation Variant detection
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e-learning
EMBL-EBI, programmatically: Take a REST from manual searches
Chemical biology Proteins Genetics Introduction API Programmatic access REST PDBe EVA Open Targets
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e-learning
Data management in Medicinal Chemistry
• beginnerComputational chemistry FAIR Data, Workflows, and Research computational-chemistry data-management fair medicinal-chemistry -
Recorded webinar
Exploring metabolite metabolism using the Enzyme Portal
Enzymes Metabolomics
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Recorded webinar
Enzyme Portal
Enzymes Biochemical pathways
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e-learning
Running molecular dynamics simulations using GROMACS
•• intermediateComputational chemistry -
Recorded webinar, Slidedeck
Europe PMC API workshop: Part one
API Literature search Literature database search Europe PMC
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