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Pan genomics tutorial using Minima2 and seq-seq-pan

• beginner
pan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment
hands-on tutorial

Hands-on for 'Antibiotic resistance detection' tutorial

metagenomics nanopore plasmids assembly amr
e-learning

Antibiotic resistance detection

• beginner
Metagenomics Microbial ecology Metagenomic sequencing Public health and epidemiology Microbiology Infectious disease Sequence analysis Antimicrobial resistance Microbiome amr …
e-learning

Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data

• beginner
Metagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome
e-learning

ERGA post-assembly QC

• beginner
Sequence assembly Assembly QC animals assembly genome plants
e-learning

Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

•• intermediate
Sequence assembly Assembly VGP eukaryote pacbio
e-learning

Large genome assembly and polishing

• beginner
Sequence assembly Assembly assembly nanopore plants polishing
e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …