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Tutorial, Training materials, Bioinformatics
How to use REPET software for de novo annotation of transposable elements in genomes
• beginnerGenomics Structural variation Bioinformatics Genome annotation Sequence classification Transposons Annotation Pipelines Docker -
Docker version of Welsh Gene Park NGS course
• beginnerNGS IFR Institute of Food Research Quadram Institute -
IFR Dockerised version of the EBI's Introduction to RNA-seq course
• beginnerRNA-Seq IFR Institute of Food Research Quadram Institute -
IFR Dockerised version of the Welsh Genepark's Introduction to Command-line NGS Analysis
• beginnerNGS Command line IFR Institute of Food Research Quadram Institute -
Multiple testing
Statistics and probability
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e-learning
A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy
• beginnerStatistics and probability Statistics and machine learning deep-learning image-segmentation interactive-tools jupyter-lab machine-learning protein-3D-structure -
Docker and Singularity for Reproducible Research: Getting Started with Containers
• beginnerreproducibility container data management data security high-performance computing -
Kitematic Galaxy-RNA-Workbench
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Help for Bioconductor
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Introduction to Containers and Snakemake for Reproducible Research
• beginnercontainer data management high-performance computing reproducibility workflows marc robinson-rechavi group training