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e-learning
Expression Atlas: Quick tour
Gene expression Gene co-expression Microarray Experimental Factor Ontology Differential expression
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e-learning
Importing files from public atlases
• beginnerSingle Cell data import data management -
Human Protein Atlas (HPA) - Introductory YouTube video
Protein expression Gene expression
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Recorded webinar
Explore gene expression across species with Expression Atlas
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Presentation
Show Case: Data Liberation and Reuse - Atlas of Brazilian Snakes
•• intermediateFAIR data Bioinformatics Data visualisation Biodiversity Data mining Business Inteligence Herpetology FAIR Data, Workflows, and Research Online Repository -
Recorded webinar
Life cell by cell: Introduction to Single Cell Expression Atlas
Gene expression
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Recorded webinar
Accessing single cell transcriptome data with the Human Cell Atlas Data Portal
Transcriptomics RNA-Seq Human biology
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Recorded webinar
Introductory bioinformatics Q&A session: genes and gene expression
Bioinformatics
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e-learning
Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
• beginnerSingle Cell data management transcriptomics -
e-learning
Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
• beginnerSingle Cell data management -
Recorded webinar
Single cell RNA-seq analysis using a Galaxy interface
RNA-Seq
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e-learning
Introductory bioinformatics: A curated set of EMBL-EBI online courses
Bioinformatics Introduction
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Course materials
Single-cell RNA-seq analysis using R
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Recorded webinar
Single-cell and spatial omics technologies in plant science
Omics Epigenomics Transcriptomics
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e-learning
PAPAA PI3K_OG: PanCancer Aberrant Pathway Activity Analysis
• beginnerStatistics and probability Machine learning Pan-cancer Statistics and machine learning cancer biomarkers oncogenes and tumor suppressor genes -
e-learning
Compute and analyze biodiversity metrics with PAMPA toolsuite
• beginnerEcology Community composition EBV class EBV dataset EBV workflow Species population EBV class modeling -
FREE online course, course materials, online course
Spatial Omics Data Analysis
••• advancedspatial Multiomics In situ sequencing Spatial Transcriptomics Single cell RNAseq -
Introduction to BRENDA
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Recorded webinar
Open access: Let's talk about open access, open data and open software
Data quality management
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Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research