Training materials
Target audience: Biologists, Genomicists, Computer Scientists or Postgraduate students or Students or biocurators or policy officer or postdoctoral researchers or service administrators in organizations that want to make use of ELIXIR AAI
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slides
GO Enrichment Analysis on Single-Cell RNA-Seq Data
• beginnerSingle Cell -
hands-on tutorial
Ecoregionalization workflow tutorial
• beginnerEcology EBV workflow earth-system ecology gbif interactive-tools modeling ocean taxonomic data -
hands-on tutorial
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
• beginnerFAIR Data, Workflows, and Research data management plan fair open -
hands-on tutorial
Decontamination of a genome assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Assembly of the mitochondrial genome from PacBio HiFi reads
• beginnerSequence assembly Assembly -
Tutorial, Training materials, Bioinformatics
How to use REPET software for de novo annotation of transposable elements in genomes
• beginnerGenomics Structural variation Bioinformatics Genome annotation Sequence classification Transposons Annotation Pipelines Docker -
hands-on tutorial
Genome annotation with Helixer
•• intermediateGenome Annotation eukaryota helixer jbrowse1 -
hands-on tutorial
Marine Omics identifying biosynthetic gene clusters
• beginnerEcology earth-system marine omics ocean -
hands-on tutorial
Querying the University of Bradford GDC Beacon Database for Copy Number Variants (CNVs)
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Working with Beacon V2: A Comprehensive Guide to Creating, Uploading, and Searching for Variants with Beacons
••• advancedGenetic variation Variant Analysis