Training materials
Target audience: Bench biologists or Clinical Scientists or Ontologists or Research Scientists or Undergraduate students or bioinformaticians
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Presentation, Recorded webinar
EOSC4Cancer cBioPortal workshop
• beginnerGenomics Oncology Data Analysis -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• intermediateProteomics proteomics quantitative proteomics -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Webinar, Training materials
An introduction to MobiDB
• beginnerintrinsically disordered proteins Databases intrinsic disorder prediction protein sequence -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
Webinar, Training materials
Exploring structural and functional annotations of IDPs with DisProt
•• intermediateCuration Databases Ontologies Intrinsically disordered proteins Protein sequence analysis Protein function analysis -
Webinar, Training materials
An introduction to DisProt
• beginnerCuration Databases Ontologies Intrinsically disordered proteins Protein sequence analysis Protein function analysis