Training materials
Target audience: Bench biologists or Biologists with little or no prior computationa... or Clinical Scientists or Ontologists or Undergraduate students or bioinformaticians
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e-learning
Identifiers in Bioinformatics
• beginnerData management Data identity and mapping Data handling Data retrieval Database search Interoperability Identifiers Standards -
Presentation, Recorded webinar
EOSC4Cancer cBioPortal workshop
• beginnerGenomics Oncology Data Analysis -
e-learning
Interoperable File Formats
• beginnerData management Formatting Interoperability File formats Standards -
e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Data management Data submission, annotation, and curation Data handling Data retrieval Database search Ontologies Interoperability Standardised vocabulary Standards -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• intermediateProteomics proteomics quantitative proteomics -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Webinar, Training materials
An introduction to MobiDB
• beginnerintrinsically disordered proteins Databases intrinsic disorder prediction protein sequence -
Webinar, Training materials
Exploring structural and functional annotations of IDPs with DisProt
•• intermediateCuration Databases Ontologies Intrinsically disordered proteins Protein sequence analysis Protein function analysis