Training materials
Standard database or policy: HumanMine or MDL molfile Format or NCBI Gene or OBO Foundry or Ontology Lookup Service or PRoteomics IDEntifications database or Plant Phenotype Experiment Ontology
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e-learning
Identifiers in Bioinformatics
• beginnerData management Data identity and mapping Data handling Data retrieval Database search Interoperability Identifiers Standards -
e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Data management Data submission, annotation, and curation Data handling Data retrieval Database search Ontologies Interoperability Standardised vocabulary Standards -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data submission, annotation, and curation Standardisation and normalisation -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation -
Book
Groovy Cheminformatics with the Chemistry Development Kit
• beginnerCheminformatics Chemistry -
InterMine Video tutorials
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Pathway and Network Analysis 2014 Module 6 - Gene Function Prediction
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Pathway and Network Analysis 2014 Module 3 - Gene Regulation Analysis
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Pathway and Network Analysis 2014 Module 1 - Introduction to Gene Lists
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