Training materials
Target audience: Students
and Scientific topics: Gene expression or Inferential statistics or Metabolomics or Protein modifications or Software engineering
-
hands-on tutorial
Versioning your code and data with git
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
A (very) brief history of genomics
• beginnerSoftware engineering Foundations of Data Science -
slides
Bioinformatics Data Types and Databases
• beginnerSoftware engineering Foundations of Data Science -
slides
A brief history of modern biology
• beginnerSoftware engineering Foundations of Data Science -
slides
Introduction to Metabolomics
• beginnerMetabolomics -
slides
Mass spectrometry: LC-MS preprocessing - advanced
• beginnerMetabolomics -
hands-on tutorial
One protein along the UniProt page
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Learning about one gene across biological resources and formats
• beginnerSoftware engineering Foundations of Data Science -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
hands-on tutorial
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• intermediateMetabolomics