Training materials
Target audience: Students
and Scientific topics: Expression analysis or Genetic variation or Metadata management or Plant biology or Software engineering or Toxicology
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hands-on tutorial
Versioning your code and data with git
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
A (very) brief history of genomics
• beginnerSoftware engineering Foundations of Data Science -
slides
Bioinformatics Data Types and Databases
• beginnerSoftware engineering Foundations of Data Science -
slides
A brief history of modern biology
• beginnerSoftware engineering Foundations of Data Science -
slides
Introduction to Variant analysis
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
One protein along the UniProt page
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Learning about one gene across biological resources and formats
• beginnerSoftware engineering Foundations of Data Science -
How to make your messy data usable? / OpenRefine
• beginnerData management Data quality management Data exploration data quality Data validation data cleaning -
hands-on tutorial
Hands-on for 'Pox virus genome analysis from tiled-amplicon sequencing data' tutorial
••• advancedvariant-analysis virology one-health -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing