Training materials
Target audience: Students
and Scientific topics: Experimental design and studies or Genetic linkage or Metabolomics or Natural language processing or Personalised medicine or Quality affairs or Transcriptomics
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
slides
Introduction to Transcriptomics
• beginnerTranscriptomics -
slides
Introduction to Metabolomics
• beginnerMetabolomics -
slides
Mass spectrometry: LC-MS preprocessing - advanced
• beginnerMetabolomics -
hands-on tutorial
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• intermediateMetabolomics -
hands-on tutorial
Inferring single cell trajectories with Monocle3
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x Single Cell paper-replication