Training materials
Scientific topics: Data security or Genetic variation or Genome annotation or Natural language processing or Pathway or network or R script or Reinforcement learning
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hands-on tutorial
Checking expected species and contamination in bacterial isolate
• beginnerEcology Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod illumina jbrowse1 microgalaxy -
slides
Introduction to Variant analysis
• beginnerGenetic variation Variant Analysis -
laderast/shinyowl
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lcolladotor/cshl_rstats_genome_scale_2024
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jjallaire/hopr
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mlr-org/mlr3book
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PAIR-code/understanding-umap
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mlabonne/llm-course