Training materials
Status: Active
and Scientific topics: Computer science or Gene expression and microarray or Genome annotation or Imaging or Metagenomics
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lessons
R basics
• beginnerInformatics Computer science R RStudio ggplot2 Rmarkdown Quarto dplyr data visualisation -
Presentation, Recorded webinar
EOSC4Cancer cBioPortal workshop
• beginnerGenomics Oncology Data Analysis -
hands-on tutorial
Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
• beginnerData management Imaging REMBI -
Training materials, slides / presentation, slide deck / presentation, Presentation
Life Science RDM 2023 Course
• beginnerData management FAIR data Biology Genomics Imaging Proteomics Bioinformatics Biodiversity Data Management Plan Data management planning Data Steward Data Stewardship Wizard Data Life Cycle Research Data Management Research Infrastructure -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
e-learning
ViralZone: Studying viral diversity
• beginnerVirology Genomics Molecular biology virology -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
Jan Pačes - SARS-CoV-2: Lectures from Evolutionary Biology
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Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization
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