Training materials
Scientific topics: Data acquisition or Metabolomics or Molecular interactions, pathways and networks or Protein binding sites or Sequence analysis or Structure prediction or Toxicology
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e-learning
IntAct: Quick tour
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e-learning
MetaboLights: Quick tour
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e-learning
PDBePISA: Identifying and interpreting the likely biological assemblies of a protein structure
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e-learning
Metabolomics: An introduction
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e-learning
Human genetic variation: Exploring publicly available data
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Karel Berka and Marian Novotný - Alphafoldology - Machine Learning revolution in structural biology
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Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote