Training materials
Target audience: Any student, postdoc or RA who has an interest ... or Ontologists or Professor or Trainers or plant researchers or post-docs
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Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
Tutorial
Adding ontology terms
••• advancedenanomapper ontologies -
Slides, course materials
Introduction to using cloud and containers for training - OpenStack and Docker oriented view
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RRegrs package
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How to use the AffyQC web tool of ArrayAnalysis.org for quality control and pre-processing of Affymetrix microarray data
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How to use the statistics module of ArrayAnalysis.org for statistics analysis of microarray data
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How to make a new pathway for WikiPathways using PathVisio
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Omics descriptors calculation R package
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Training materials
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics
•• intermediateGenotype and phenotype Phylogenomics Evolutionary biology Comparative genomics Functional genomics Plant biology Comparison Visualisation Annotation plants Plants bioinformatics genomics Visualisation Annotation