Training materials
Scientific topics: Data acquisition or Data mining or Genome assembly or Mass spectrometry or Sequencing or Transcriptomics
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slides
Slides for 'Plates, Batches, and Barcodes' tutorial
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slides
Slides for 'Clustering 3K PBMCs with Scanpy' tutorial
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slides
Slides for 'Dealing with Cross-Contamination in Fixed Barcode Protocols' tutorial
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slides
An introduction to scRNA-seq data analysis
•• intermediateTranscriptomics Single Cell -
slides
Introduction to 'Transcriptomics'
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Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Video, Tutorial
galaxy.sciensano.be
• beginnerBioinformatics Public health and epidemiology Genomics Sequencing Microbiology -
course materials, Training materials, Slides, Video
RNA-seq data analysis using Chipster
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining