Training materials
Licence: Creative Commons Attribution 4.0 International
and Scientific topics: Data quality management or Metabolites or Oncology or Protein modifications or Simulation experiment
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slides
Introduction to Metabolomics
• beginnerMetabolomics -
slides
Mass spectrometry: LC-MS preprocessing - advanced
• beginnerMetabolomics -
Presentation, Recorded webinar
EOSC4Cancer cBioPortal workshop
• beginnerGenomics Oncology Data Analysis -
Presentation
FAIRtracks and Omnipy – FAIRtracks interoperability story
•• intermediateData submission, annotation, and curation Data identity and mapping Data quality management Data governance Workflows Data handling -
How to make your messy data usable? / OpenRefine
• beginnerData management Data quality management Data exploration data quality Data validation data cleaning -
hands-on tutorial
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• intermediateMetabolomics -
hands-on tutorial
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics -
hands-on tutorial
Mass spectrometry imaging: Finding differential analytes
•• intermediateMetabolomics -
hands-on tutorial
Mass spectrometry : GC-MS analysis with metaMS package
• beginnerMetabolomics -
hands-on tutorial
Mass spectrometry: LC-MS analysis
• beginnerMetabolomics
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