Training materials
Licence: Creative Commons Attribution 4.0 International
and Scientific topics: Cell biology or ChIP-seq or Computer science or Data architecture, analysis and design or Gene expression and microarray or Imaging
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lessons
R basics
• beginnerInformatics Computer science R RStudio ggplot2 Rmarkdown Quarto dplyr data visualisation -
hands-on tutorial
Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
• beginnerData management Imaging REMBI -
bioinformatics-core-shared-training/Quantitative-ChIPseq-Workshop
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course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
WORKSHOP: R: fundamental skills for biologists
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hands-on tutorial
Hands-on for 'Analyse HeLa fluorescence siRNA screen' tutorial
•• intermediateimaging HeLa -
hands-on tutorial
Hands-on for 'Introduction to image analysis using Galaxy' tutorial
• beginnerimaging HeLa -
Presentation
Reproducible analysis
• beginnerData architecture, analysis and design Workflows Literate programming Reproducible Science Data analysis -
Presentation
Reproducible data analysis with RStudio, github and Rmarkdown
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Training materials
Adding schema.org to a GitHub Pages site
• beginnerComputer science Mark-up Bioschemas Interoperability