Training materials
Licence: Creative Commons Attribution 4.0 International
and Scientific topics: Bioinformatics or DNA variation or Genome annotation or Mass spectrometry or Protein expression
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hands-on tutorial
Checking expected species and contamination in bacterial isolate
• beginnerEcology Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod illumina jbrowse1 microgalaxy -
slides
Introduction to Variant analysis
• beginnerGenetic variation Variant Analysis -
Slides
Navigating Licensing in Bioinformatics: Software and Data Perspectives
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lessons
Introduction to g:Profiler
• beginnerBioinformatics g:Profiler Enrichment analysis Enrichment -
Presentation, Recorded webinar
EOSC4Cancer cBioPortal workshop
• beginnerGenomics Oncology Data Analysis -
sib-swiss/NGS-introduction-training
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bioinformatics-core-shared-training/cruk-summer-school-2020
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks