Training materials
Licence: Creative Commons Attribution 4.0 International
and Scientific topics: Bioimaging or Bioinformatics or Computer science or Drug discovery or Genome assembly or RNA or Sequence assembly
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hands-on tutorial
Binning of metagenomic sequencing data
• beginnerMetagenomics Microbial ecology Sequence assembly Microbiome binning metagenomics microgalaxy -
hands-on tutorial
Assembly of metagenomic sequencing data
• beginnerSequence assembly Metagenomics Assembly assembly metagenomics microgalaxy -
hands-on tutorial
ERGA post-assembly QC
• beginnerSequence assembly Assembly -
lessons
R basics
• beginnerInformatics Computer science R RStudio ggplot2 Rmarkdown Quarto dplyr data visualisation -
Slides
Navigating Licensing in Bioinformatics: Software and Data Perspectives
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lessons
Introduction to g:Profiler
• beginnerBioinformatics g:Profiler Enrichment analysis Enrichment -
Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
tutorials
ProteomicsML
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e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Data management Data submission, annotation, and curation Data handling Data retrieval Database search Ontologies Interoperability Standardised vocabulary Standards -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing