Training materials
Licence: Creative Commons Attribution 4.0 International
and Scientific topics: Agricultural science or Computer science or Data architecture, analysis and design or Protein structure analysis or Toxicology
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lessons
R basics
• beginnerInformatics Computer science R RStudio ggplot2 Rmarkdown Quarto dplyr data visualisation -
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
WORKSHOP: R: fundamental skills for biologists
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Presentation
Reproducible analysis
• beginnerData architecture, analysis and design Workflows Literate programming Reproducible Science Data analysis -
Presentation
Reproducible data analysis with RStudio, github and Rmarkdown
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Tutorial
OpenRiskNet: Ontology Walkthrough and Workshop
• beginnerToxicology Ontology and terminology -
Training materials
Adding schema.org to a GitHub Pages site
• beginnerComputer science Mark-up Bioschemas Interoperability -
Tutorial
Adding nanomaterial data
•• intermediateToxicology Database management ontologies enanomapper RDF