Training materials
Scientific topics: Data acquisition or Ontology or Personalised medicine or Sequence analysis
and Licence: Creative Commons Attribution 4.0 International or GNU General Public License v2.0 only
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
e-learning
Use V-pipe to evaluate SARS-CoV-2 sequence variability
• beginnerVirology Sequence analysis SARS-CoV-2 Variant calling -
WEBINAR: bio.tools - making it easier to find, understand and cite biological tools and software
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hands-on tutorial
Hands-on for 'Removal of human reads from SARS-CoV-2 sequencing data' tutorial
•• intermediatesequence-analysis covid19 -
hands-on tutorial
Mapping
• beginnerSequence analysis Mapping -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Tutorial
OpenRiskNet: Ontology Walkthrough and Workshop
• beginnerToxicology Ontology and terminology