Training materials
Keywords: collections or deconvolution or image analysis or rmarkdown-notebook or workflows
and Target audience: Any student, postdoc or RA who has an interest ... or Students or data steward / data manager
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hands-on tutorial
Creating high resolution images of Galaxy Workflows
• beginnerUsing Galaxy and Managing your Data workflows -
hands-on tutorial
Multisample Analysis
••• advancedUsing Galaxy and Managing your Data collections -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Exporting Workflow Run RO-Crates from Galaxy
• beginnerFAIR Data, Workflows, and Research ro-crate workflows -
slides
Slides for 'BioImage Model Zoo: Advanced models in one-click' tutorial
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slides
Slides for 'Welcome to the BioImage Model Zoo' tutorial
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hands-on tutorial
Inferring single cell trajectories with Monocle3 (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial