Training materials
Scientific topics: FAIR data or Marine biology or Metatranscriptomics or Software engineering or Toxicology
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sib-swiss/reproducible-analysis-training
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hbctraining/Training-modules
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galaxyproject/training-material
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Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Hands-on for 'SQL with R' tutorial
•• intermediatedata-science SQL R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediatedata-science R -
hands-on tutorial
Hands-on for 'dplyr & tidyverse for data processing' tutorial
••• advanceddata-science R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Hands-on for 'R basics in Galaxy' tutorial
• beginnerdata-science interactive-tools R -
Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR Standards Ontology SNOMED CT LOINC ATC CHOP ICD Interoperability -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB
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