Training materials
Keywords: Protein sequence analysis or bash or climate or evolution or one-health
and Target audience: Any student, postdoc or RA who has an interest ... or Bench biologists or Master students or Students
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hands-on tutorial
Phylogenetics - Back to basics
•• intermediateEvolutionary biology Evolution evolution phylogenetics -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Pox virus genome analysis from tiled-amplicon sequencing data
••• advancedGenetic variation Variant Analysis one-health virology -
hands-on tutorial
Avian influenza viral strain analysis from gene segment sequencing data
•• intermediateGenetic variation Variant Analysis one-health virology -
hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
Webinar, Training materials
Exploring structural and functional annotations of IDPs with DisProt
•• intermediateCuration Databases Ontologies Intrinsically disordered proteins Protein sequence analysis Protein function analysis -
Webinar, Training materials
An introduction to DisProt
• beginnerCuration Databases Ontologies Intrinsically disordered proteins Protein sequence analysis Protein function analysis -
hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis
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