Training materials
Keywords: Interoperability or Programmatic access or Rare Diseases & Research or Reproducible Environment
and Resource type: Documentation or e-learning
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e-learning
Identifiers in Bioinformatics
• beginnerData management Data identity and mapping Data handling Data retrieval Database search Interoperability Identifiers Standards -
e-learning
Interoperable File Formats
• beginnerData management Formatting Interoperability File formats Standards -
e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Data management Data submission, annotation, and curation Data handling Data retrieval Database search Ontologies Interoperability Standardised vocabulary Standards -
e-learning
Ensembl: Filmed Perl API Workshop
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e-learning
Ensembl: REST API
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e-learning
Biocuration: A curated set of EMBL-EBI online courses
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e-learning
Using publicly available data: An introduction
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e-learning
EMBL-EBI, programmatically: Take a REST from manual searches
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Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
e-learning
EJP RD MOOC "Diagnosing Rare Diseases: from the Clinic to Research and back"
•• intermediateRare diseases Rare Diseases & Research