Training materials
Keywords: HMMs or Programming or nanopore or on-line or one-health
and Resource type: Data Science or e-learning or hands-on tutorial or slideck/ presentation
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Antibiotic resistance detection
• beginnerMetagenomics Microbial ecology Metagenomic sequencing Public health and epidemiology Microbiology Infectious disease Sequence analysis Antimicrobial Resistance Microbiome amr assembly microgalaxy nanopore plasmids -
hands-on tutorial
16S Microbial analysis with Nanopore data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy nanopore -
Bioinformatics, Computational Biology, Computer Science, Programming, Coding, Education, Data Science, Transcriptomics, Machine Learning
R for Data Science
•• intermediateBioinformatics Computational biology Machine learning Transcriptomics Computational Biology Coding Programming Data Science Data Analysis Computer Science Machine Learning -
hands-on tutorial
Gentle Introduction to Python
• beginnerPython script Software engineering Programming Python -
hands-on tutorial
Pox virus genome analysis from tiled-amplicon sequencing data
••• advancedGenetic variation Variant Analysis one-health virology -
e-learning
Pfam: Repeats in Pfam
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e-learning
Pfam: Creating protein families
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hands-on tutorial
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore polishing -
e-learning
Biocuration: A curated set of EMBL-EBI online courses