Training materials
Keywords: FAIR principles or Reproducibility or Unix or genome-annotation or interactive-tools or virology
and Resource type: Online material or e-learning or hands-on tutorial
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hands-on tutorial
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
e-learning
ViralZone: Studying viral diversity
• beginnerVirology Genomics Molecular biology virology -
hands-on tutorial
Pox virus genome analysis from tiled-amplicon sequencing data
••• advancedGenetic variation Variant Analysis one-health virology -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Avian influenza viral strain analysis from gene segment sequencing data
•• intermediateGenetic variation Variant Analysis one-health virology -
hands-on tutorial
Hands-on for 'Visualize EBV cube data with Panoply netCDF viewer' tutorial
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hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Hands-on for 'Essential genes detection with Transposon insertion sequencing' tutorial