Training materials
Keywords: EeLP or Exploratory-analysis or Extras or NGS or Protein sequence analysis or Roslin Institute or ansible or metagenomics
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Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
tutorial
Introduction to NGS Data Management
• beginnerRDM Research Data Management NGS Bioinformatics Data Management Plan -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
hands-on tutorial
Hands-on for 'Monitoring Galaxy and Pulsar with Sentry' tutorial
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hands-on tutorial
Hands-on for 'Use Apptainer containers for running Galaxy jobs' tutorial
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hands-on tutorial
Hands-on for 'Setting up Celery Workers for Galaxy' tutorial
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hands-on tutorial
Hands-on for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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e-learning
Introduction to single cell RNAseq analysis workshop
• beginnerbioinformatics RNAseq single cell NGS python R -
e-learning
Introduction to bulk RNAseq analysis workshop
• beginnerbioinformatics RNAseq bulk NGS -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa