Training materials
Scientific topics: Animal study or Drug discovery or Protein interactions or Proteomics or R script or Toxicology
and Keywords: Cloud computing or DDA or Peptide
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ucdavis-bioinformatics-training/2020-Bioinformatics_Prerequisites_Workshop
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hands-on tutorial
Biomarker candidate identification
• beginnerProteomics DDA human -
hands-on tutorial
Annotating a protein list identified by LC-MS/MS experiments
• beginnerProteomics DDA human -
hands-on tutorial
MaxQuant and MSstats for the analysis of TMT data
• beginnerProteomics DDA TMT -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Label-free data analysis using MaxQuant
• beginnerProteomics DDA label-free -
hands-on tutorial
Peptide and Protein ID using OpenMS tools
••• advancedProteomics DDA HeLa -
hands-on tutorial
Protein FASTA Database Handling
• beginnerProteomics DDA
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